PLGrid PLGrid Documentation

Helios GPU

Some software in the list below may require an additional licence and may not be generally available to all PLGrid users.

ATK

ATK provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.

Versions Environment loading command (via Lmod)
2.38.0
GCCcore/13.2.0 ATK/2.38.0

AlphaFold

AlphaFold3

Versions Environment loading command (via Lmod)
3.0.1
AlphaFold/3.0.1

Amber

Amber (originally Assisted Model Building with Energy Refinement) is software for performing molecular dynamics and structure prediction.

Versions Environment loading command (via Lmod)
24.3-AmberTools-25.0-CUDA-12.4.0
GCC/13.2.0 OpenMPI/5.0.3 Amber/24.3-AmberTools-25.0-CUDA-12.4.0
24.3-AmberTools-24.8-CUDA-12.4.0
GCC/13.2.0 OpenMPI/5.0.3 Amber/24.3-AmberTools-24.8-CUDA-12.4.0

AutoDock-GPU

OpenCL and Cuda accelerated version of AutoDock. It leverages its embarrassingly parallelizable LGA by processing ligand-receptor poses in parallel over multiple compute units. AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.

Versions Environment loading command (via Lmod)
1.5.3-CUDA-12.8.0
GCC/13.2.0 AutoDock-GPU/1.5.3-CUDA-12.8.0

Autoconf

Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls.

Versions Environment loading command (via Lmod)
2.72
GCCcore/14.3.0 Autoconf/2.72
2.71
GCCcore/13.2.0 Autoconf/2.71
2.71
Autoconf/2.71

Automake

Automake: GNU Standards-compliant Makefile generator

Versions Environment loading command (via Lmod)
1.18
GCCcore/14.3.0 Automake/1.18
1.16.5
GCCcore/13.2.0 Automake/1.16.5
1.16.5
Automake/1.16.5

Autotools

This bundle collect the standard GNU build tools: Autoconf, Automake and libtool

Versions Environment loading command (via Lmod)
20250527
GCCcore/14.3.0 Autotools/20250527
20220317
GCCcore/13.2.0 Autotools/20220317
20220317
Autotools/20220317

BLIS

BLIS is a portable software framework for instantiating high-performance BLAS-like dense linear algebra libraries.

Versions Environment loading command (via Lmod)
2.0
llvm-compilers/20.1.8 BLIS/2.0
2.0
GCC/14.3.0 BLIS/2.0
0.9.0
GCC/13.2.0 BLIS/0.9.0

BeautifulSoup

Beautiful Soup is a Python library designed for quick turnaround projects like screen-scraping.

Versions Environment loading command (via Lmod)
4.14.2
GCCcore/14.3.0 BeautifulSoup/4.14.2
4.12.2
GCCcore/13.2.0 BeautifulSoup/4.12.2

Bison

Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables.

Versions Environment loading command (via Lmod)
3.8.2
GCCcore/14.3.0 Bison/3.8.2
3.8.2
GCCcore/13.2.0 Bison/3.8.2
3.8.2
GCCcore/12.3.0 Bison/3.8.2
3.8.2
Bison/3.8.2

Boost

Boost provides free peer-reviewed portable C++ source libraries.

Versions Environment loading command (via Lmod)
1.88.0
llvm-compilers/20.1.8 Boost/1.88.0
1.88.0
GCC/14.3.0 Boost/1.88.0
1.83.0
GCC/13.2.0 Boost/1.83.0

Brotli

Brotli is a generic-purpose lossless compression algorithm that compresses data using a combination of a modern variant of the LZ77 algorithm, Huffman coding and 2nd order context modeling, with a compression ratio comparable to the best currently available general-purpose compression methods. It is similar in speed with deflate but offers more dense compression. The specification of the Brotli Compressed Data Format is defined in RFC 7932.

Versions Environment loading command (via Lmod)
1.1.0
GCCcore/14.3.0 Brotli/1.1.0
1.1.0
GCCcore/13.2.0 Brotli/1.1.0
1.1.0
Brotli/1.1.0

CFITSIO

CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format.

Versions Environment loading command (via Lmod)
4.3.1
GCCcore/13.2.0 CFITSIO/4.3.1

CMake

CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software.

Versions Environment loading command (via Lmod)
4.0.3
GCCcore/14.3.0 CMake/4.0.3
3.31.8
GCCcore/14.3.0 CMake/3.31.8
3.29.3
GCCcore/13.2.0 CMake/3.29.3
3.27.6
GCCcore/13.2.0 CMake/3.27.6
3.27.6
CMake/3.27.6

CUDA

CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs.

Versions Environment loading command (via Lmod)
12.9.1
CUDA/12.9.1
12.8.0
CUDA/12.8.0
12.4.0
CUDA/12.4.0

Catch2

A modern, C++-native, header-only, test framework for unit-tests, TDD and BDD - using C++11, C++14, C++17 and later

Versions Environment loading command (via Lmod)
2.13.10
GCCcore/14.3.0 Catch2/2.13.10
2.13.9
GCCcore/13.2.0 Catch2/2.13.9

Clang

C, C++, Objective-C compiler, based on LLVM. Does not include C++ standard library -- use libstdc++ from GCC.

Versions Environment loading command (via Lmod)
21.1.2-CUDA-12.9.1
GCCcore/14.3.0 Clang/21.1.2-CUDA-12.9.1
17.0.6-CUDA-12.8.0
GCCcore/13.2.0 Clang/17.0.6-CUDA-12.8.0
17.0.6-CUDA-12.4.0
GCCcore/13.2.0 Clang/17.0.6-CUDA-12.4.0

CppUnit

CppUnit is the C++ port of the famous JUnit framework for unit testing.

Versions Environment loading command (via Lmod)
1.15.1
CppUnit/1.15.1

Cython

Cython is an optimising static compiler for both the Python programming language and the extended Cython programming language (based on Pyrex).

Versions Environment loading command (via Lmod)
3.1.2
GCCcore/14.3.0 Cython/3.1.2

DBus

D-Bus is a message bus system, a simple way for applications to talk to one another. In addition to interprocess communication, D-Bus helps coordinate process lifecycle; it makes it simple and reliable to code a "single instance" application or daemon, and to launch applications and daemons on demand when their services are needed.

Versions Environment loading command (via Lmod)
1.16.2
GCCcore/14.3.0 DBus/1.16.2
1.15.8
GCCcore/13.2.0 DBus/1.15.8

Doxygen

Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D.

Versions Environment loading command (via Lmod)
1.14.0
GCCcore/14.3.0 Doxygen/1.14.0
1.9.8
GCCcore/13.2.0 Doxygen/1.9.8
1.9.8
Doxygen/1.9.8

ESMFold

Evolutionary Scale Modeling

Versions Environment loading command (via Lmod)
2.0.1
ESMFold/2.0.1

Eigen

Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms.

Versions Environment loading command (via Lmod)
3.4.0
GCCcore/14.3.0 Eigen/3.4.0
3.4.0
GCCcore/13.2.0 Eigen/3.4.0

Emacs

GNU Emacs is an extensible, customizable text editor--and more. At its core is an interpreter for Emacs Lisp, a dialect of the Lisp programming language with extensions to support text editing.

Versions Environment loading command (via Lmod)
29.1
GCCcore/13.2.0 Emacs/29.1

FFTW

FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data.

Versions Environment loading command (via Lmod)
3.3.10
llvm-compilers/20.1.8 FFTW/3.3.10
3.3.10
GCC/14.3.0 FFTW/3.3.10
3.3.10
GCC/13.2.0 FFTW/3.3.10
3.3.10
GCC/12.3.0 FFTW/3.3.10

FFTW.MPI

FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data.

Versions Environment loading command (via Lmod)
3.3.10
llvm-compilers/20.1.8 OpenMPI/5.0.8 FFTW.MPI/3.3.10
3.3.10
GCC/14.3.0 OpenMPI/5.0.8 FFTW.MPI/3.3.10
3.3.10
GCC/13.2.0 OpenMPI/5.0.3 FFTW.MPI/3.3.10

FFmpeg

A complete, cross-platform solution to record, convert and stream audio and video.

Versions Environment loading command (via Lmod)
7.1.2
GCCcore/14.3.0 FFmpeg/7.1.2
6.0
GCCcore/13.2.0 FFmpeg/6.0

FLAC

FLAC stands for Free Lossless Audio Codec, an audio format similar to MP3, but lossless, meaning that audio is compressed in FLAC without any loss in quality.

Versions Environment loading command (via Lmod)
1.5.0
GCCcore/14.3.0 FLAC/1.5.0
1.4.2
GCCcore/13.2.0 FLAC/1.4.2

FLUENT

Ansys/Fluent

Versions Environment loading command (via Lmod)
2025r1
FLUENT/2025r1

FUSE

The reference implementation of the Linux FUSE (Filesystem in Userspace) interface

Versions Environment loading command (via Lmod)
3.16.2
GCCcore/13.2.0 FUSE/3.16.2

FlexiBLAS

FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation used by a program without recompiling or relinking it.

Versions Environment loading command (via Lmod)
3.4.5
llvm-compilers/20.1.8 FlexiBLAS/3.4.5
3.4.5
GCC/14.3.0 FlexiBLAS/3.4.5
3.3.1
GCC/13.2.0 FlexiBLAS/3.3.1

FriBidi

The Free Implementation of the Unicode Bidirectional Algorithm.

Versions Environment loading command (via Lmod)
1.0.16
GCCcore/14.3.0 FriBidi/1.0.16
1.0.13
GCCcore/13.2.0 FriBidi/1.0.13

GCC

The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).

Versions Environment loading command (via Lmod)
14.3.0
GCC/14.3.0
13.2.0
GCC/13.2.0
12.3.0
GCC/12.3.0

GCCcore

The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).

Versions Environment loading command (via Lmod)
14.3.0
GCCcore/14.3.0
13.2.0
GCCcore/13.2.0
12.3.0
GCCcore/12.3.0

GDRCopy

A low-latency GPU memory copy library based on NVIDIA GPUDirect RDMA technology.

Versions Environment loading command (via Lmod)
2.5
GCCcore/14.3.0 GDRCopy/2.5
2.4.4
GCCcore/13.2.0 GDRCopy/2.4.4

GLib

GLib is one of the base libraries of the GTK+ project

Versions Environment loading command (via Lmod)
2.85.3
GCCcore/14.3.0 GLib/2.85.3
2.78.1
GCCcore/13.2.0 GLib/2.78.1

GMP

GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers.

Versions Environment loading command (via Lmod)
6.3.0
GCCcore/14.3.0 GMP/6.3.0
6.3.0
GCCcore/13.2.0 GMP/6.3.0

GObject-Introspection

GObject introspection is a middleware layer between C libraries (using GObject) and language bindings. The C library can be scanned at compile time and generate a metadata file, in addition to the actual native C library. Then at runtime, language bindings can read this metadata and automatically provide bindings to call into the C library.

Versions Environment loading command (via Lmod)
1.84.0
GCCcore/14.3.0 GObject-Introspection/1.84.0
1.78.1
GCCcore/13.2.0 GObject-Introspection/1.78.1

GROMACS

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. Binaries included: * gmx: Compiled with support for OpenMP * gmx_mpi: Compiled with support for MPI and OpenMP. * gmx_d: Compiled with support for OpenMP and using double precision arithmetic. * gmx_mpi_d: Compiled with support for MPI and OpenMP and using double precision arithmetic. The module sets the environment variables that would otherwise be set by running the script $EBROOTGROMACS/bin/GMXRC. So running this script snould not be necessary in most cases. The module also defines the shell function gromacs-completion that can be used to turn bash command completion on for GROMACS. Note that unloading the module will not turn this off, so it may have consequences for things you do later on or conflict with the command completion of a different version of GROMACS.

Versions Environment loading command (via Lmod)
2025.3-CUDA-12.9.1
GCC/14.3.0 OpenMPI/5.0.8 GROMACS/2025.3-CUDA-12.9.1
2025.1-CUDA-12.8.0-nompi
GCC/13.2.0 GROMACS/2025.1-CUDA-12.8.0-nompi
2024.3-CUDA-12.8.0-nompi
GCC/13.2.0 GROMACS/2024.3-CUDA-12.8.0-nompi
2024.3-CUDA-12.4.0-nompi
GCC/13.2.0 GROMACS/2024.3-CUDA-12.4.0-nompi
2023.5-CUDA-12.8.0
GCC/13.2.0 OpenMPI/5.0.3 GROMACS/2023.5-CUDA-12.8.0
2023.5-CUDA-12.4.0
GCC/13.2.0 OpenMPI/5.0.3 GROMACS/2023.5-CUDA-12.4.0

GSL

The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting.

Versions Environment loading command (via Lmod)
2.8
GCC/14.3.0 GSL/2.8

GTK3

GTK+ is the primary library used to construct user interfaces in GNOME. It provides all the user interface controls, or widgets, used in a common graphical application. Its object-oriented API allows you to construct user interfaces without dealing with the low-level details of drawing and device interaction.

Versions Environment loading command (via Lmod)
3.24.39
GCCcore/13.2.0 GTK3/3.24.39

GTS

GTS stands for the GNU Triangulated Surface Library. It is an Open Source Free Software Library intended to provide a set of useful functions to deal with 3D surfaces meshed with interconnected triangles.

Versions Environment loading command (via Lmod)
0.7.6
GCCcore/13.2.0 GTS/0.7.6

Gdk-Pixbuf

The Gdk Pixbuf is a toolkit for image loading and pixel buffer manipulation. It is used by GTK+ 2 and GTK+ 3 to load and manipulate images. In the past it was distributed as part of GTK+ 2 but it was split off into a separate package in preparation for the change to GTK+ 3.

Versions Environment loading command (via Lmod)
2.42.12
GCCcore/14.3.0 Gdk-Pixbuf/2.42.12
2.42.10
GCCcore/13.2.0 Gdk-Pixbuf/2.42.10

Ghostscript

Ghostscript is a versatile processor for PostScript data with the ability to render PostScript to different targets. It used to be part of the cups printing stack, but is no longer used for that.

Versions Environment loading command (via Lmod)
10.02.1
GCCcore/13.2.0 Ghostscript/10.02.1

GitPython

GitPython is a python library used to interact with Git repositories

Versions Environment loading command (via Lmod)
3.1.45
GCCcore/14.3.0 GitPython/3.1.45

Go

Go is an open source programming language that makes it easy to build simple, reliable, and efficient software.

Versions Environment loading command (via Lmod)
1.22.1
Go/1.22.1

Grace

Grace is a WYSIWYG tool to make two-dimensional plots of numerical data.

Versions Environment loading command (via Lmod)
5.1.25
GCC/13.2.0 OpenMPI/5.0.3 Grace/5.1.25

Greenlet

The greenlet package is a spin-off of Stackless, a version of CPython that supports micro-threads called "tasklets". Tasklets run pseudo-concurrently (typically in a single or a few OS-level threads) and are synchronized with data exchanges on "channels". A "greenlet", on the other hand, is a still more primitive notion of micro-thread with no implicit scheduling; coroutines, in other words. This is useful when you want to control exactly when your code runs.

Versions Environment loading command (via Lmod)
3.2.3
GCCcore/14.3.0 Greenlet/3.2.3
3.0.3
GCCcore/13.2.0 Greenlet/3.0.3

HDF5

HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data.

Versions Environment loading command (via Lmod)
1.14.6-serial
llvm-compilers/20.1.8 HDF5/1.14.6-serial
1.14.6-serial
GCC/14.3.0 HDF5/1.14.6-serial
1.14.6
llvm-compilers/20.1.8 OpenMPI/5.0.8 HDF5/1.14.6
1.14.6
GCC/14.3.0 OpenMPI/5.0.8 HDF5/1.14.6
1.14.3
NVHPC/24.5-CUDA-12.4.0 OpenMPI/5.0.3 HDF5/1.14.3
1.14.3
GCC/13.2.0 OpenMPI/5.0.3 HDF5/1.14.3

HMMER

HMMER is used for searching sequence databases for homologs of protein sequences, and for making protein sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs). Compared to BLAST, FASTA, and other sequence alignment and database search tools based on older scoring methodology, HMMER aims to be significantly more accurate and more able to detect remote homologs because of the strength of its underlying mathematical models. In the past, this strength came at significant computational expense, but in the new HMMER3 project, HMMER is now essentially as fast as BLAST.

Versions Environment loading command (via Lmod)
3.4-seqlimit
GCC/14.3.0 OpenMPI/5.0.8 HMMER/3.4-seqlimit
3.4
GCC/14.3.0 OpenMPI/5.0.8 HMMER/3.4

HTSlib

A C library for reading/writing high-throughput sequencing data. This package includes the utilities bgzip and tabix

Versions Environment loading command (via Lmod)
1.19.1
GCC/13.2.0 HTSlib/1.19.1

HTTPX

HTTPX is a fully featured HTTP client library for Python 3. It includes an integrated command line client, has support for both HTTP/1.1 and HTTP/2, and provides both sync and async APIs.

Versions Environment loading command (via Lmod)
0.28.1
GCCcore/14.3.0 HTTPX/0.28.1

HarfBuzz

HarfBuzz is an OpenType text shaping engine.

Versions Environment loading command (via Lmod)
11.4.1
GCCcore/14.3.0 HarfBuzz/11.4.1
8.2.2
GCCcore/13.2.0 HarfBuzz/8.2.2

Highway

Highway is a C++ library for SIMD (Single Instruction, Multiple Data), i.e. applying the same operation to 'lanes'.

Versions Environment loading command (via Lmod)
1.2.0
GCCcore/13.2.0 Highway/1.2.0

ICU

ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications.

Versions Environment loading command (via Lmod)
77.1
GCCcore/14.3.0 ICU/77.1
74.1
GCCcore/13.2.0 ICU/74.1

IPython

IPython provides a rich architecture for interactive computing with: Powerful interactive shells (terminal and Qt-based). A browser-based notebook with support for code, text, mathematical expressions, inline plots and other rich media. Support for interactive data visualization and use of GUI toolkits. Flexible, embeddable interpreters to load into your own projects. Easy to use, high performance tools for parallel computing.

Versions Environment loading command (via Lmod)
9.4.0
GCCcore/14.3.0 IPython/9.4.0
8.17.2
GCCcore/13.2.0 IPython/8.17.2

ImageMagick

ImageMagick is a software suite to create, edit, compose, or convert bitmap images

Versions Environment loading command (via Lmod)
7.1.1-34
GCCcore/13.2.0 ImageMagick/7.1.1-34

Imath

Imath is a C++ and python library of 2D and 3D vector, matrix, and math operations for computer graphics

Versions Environment loading command (via Lmod)
3.1.9
GCCcore/13.2.0 Imath/3.1.9

JasPer

The JasPer Project is an open-source initiative to provide a free software-based reference implementation of the codec specified in the JPEG-2000 Part-1 standard.

Versions Environment loading command (via Lmod)
4.2.8
GCCcore/14.3.0 JasPer/4.2.8
4.0.0
GCCcore/13.2.0 JasPer/4.0.0

Java

Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.

Versions Environment loading command (via Lmod)
21.0.2
Java/21.0.2
11.0.20
Java/11.0.20

Jupyter-bundle

This bundle collects a range of Jupyter interfaces (Lab, Notebook and nbclassic), extensions (Jupyter Server Proxy, Jupyter Resource Monitor, Jupyter Lmod) and the JupyterHub.

Versions Environment loading command (via Lmod)
20260318
GCCcore/14.3.0 Jupyter-bundle/20260318
20251112
GCCcore/14.3.0 Jupyter-bundle/20251112

JupyterHub

JupyterHub is a multiuser version of the Jupyter (IPython) notebook designed for centralized deployments in companies, university classrooms and research labs.

Versions Environment loading command (via Lmod)
5.4.2
GCCcore/14.3.0 JupyterHub/5.4.2
4.1.5
GCCcore/13.2.0 JupyterHub/4.1.5

JupyterLab

JupyterLab is the next-generation user interface for Project Jupyter offering all the familiar building blocks of the classic Jupyter Notebook (notebook, terminal, text editor, file browser, rich outputs, etc.) in a flexible and powerful user interface. JupyterLab will eventually replace the classic Jupyter Notebook.

Versions Environment loading command (via Lmod)
4.5.6
GCCcore/14.3.0 JupyterLab/4.5.6
4.4.9
GCCcore/14.3.0 JupyterLab/4.4.9
4.2.0
GCCcore/13.2.0 JupyterLab/4.2.0

JupyterLab-git

A JupyterLab extension for version control using Git

Versions Environment loading command (via Lmod)
0.52.0
GCCcore/14.3.0 JupyterLab-git/0.52.0
0.51.2
GCCcore/14.3.0 JupyterLab-git/0.51.2

JupyterNotebook

The Jupyter Notebook is the original web application for creating and sharing computational documents. It offers a simple, streamlined, document-centric experience.

Versions Environment loading command (via Lmod)
7.4.7
GCCcore/14.3.0 JupyterNotebook/7.4.7
7.2.0
GCCcore/13.2.0 JupyterNotebook/7.2.0

LAME

LAME is a high quality MPEG Audio Layer III (MP3) encoder licensed under the LGPL.

Versions Environment loading command (via Lmod)
3.100
GCCcore/14.3.0 LAME/3.100
3.100
GCCcore/13.2.0 LAME/3.100

LAMMPS

LAMMPS Molecular Dynamics Simulator

Versions Environment loading command (via Lmod)
29Aug2024-MACE
GCC/13.2.0 OpenMPI/5.0.3 LAMMPS/29Aug2024-MACE
22Jul2025-kokkos-CUDA-12.9.1
GCC/14.3.0 OpenMPI/5.0.8 LAMMPS/22Jul2025-kokkos-CUDA-12.9.1
10Sep2025-MACE
GCC/13.2.0 OpenMPI/5.0.3 LAMMPS/10Sep2025-MACE

LLVM

The LLVM Core libraries provide a modern source- and target-independent optimizer, along with code generation support for many popular CPUs (as well as some less common ones!) These libraries are built around a well specified code representation known as the LLVM intermediate representation ("LLVM IR

Versions Environment loading command (via Lmod)
20.1.8
GCCcore/14.3.0 LLVM/20.1.8
16.0.6
LLVM/16.0.6
16.0.6
GCCcore/13.2.0 LLVM/16.0.6

Leptonica

Leptonica is a collection of pedagogically-oriented open source software that is broadly useful for image processing and image analysis applications.

Versions Environment loading command (via Lmod)
1.85.0
GCCcore/13.2.0 Leptonica/1.85.0

LibTIFF

tiff: Library and tools for reading and writing TIFF data files

Versions Environment loading command (via Lmod)
4.7.0
GCCcore/14.3.0 LibTIFF/4.7.0
4.6.0
GCCcore/13.2.0 LibTIFF/4.6.0

LittleCMS

Little CMS intends to be an OPEN SOURCE small-footprint color management engine, with special focus on accuracy and performance.

Versions Environment loading command (via Lmod)
2.15
GCCcore/13.2.0 LittleCMS/2.15

Lmod

Lmod is a Lua based module system. Modules allow for dynamic modification of a user's environment under Unix systems. See www.tacc.utexas.edu/tacc-projects/lmod for a complete description. Lmod is a new implementation that easily handles the MODULEPATH Hierarchical problem. It is drop-in replacement for TCL/C modules and reads TCL modulefiles directly.

Versions Environment loading command (via Lmod)
8.7.37
Lmod/8.7.37

Lua

Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.

Versions Environment loading command (via Lmod)
5.4.6
Lua/5.4.6

LuaRocks

LuaRocks is the package manager for Lua modules. It allows you to create and install Lua modules as self-contained packages called rocks.

Versions Environment loading command (via Lmod)
3.11.1
LuaRocks/3.11.1

M4

GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc.

Versions Environment loading command (via Lmod)
1.4.20
M4/1.4.20
1.4.20
GCCcore/14.3.0 M4/1.4.20
1.4.19
M4/1.4.19
1.4.19
GCCcore/13.2.0 M4/1.4.19
1.4.19
GCCcore/12.3.0 M4/1.4.19

MATIO

matio is an C library for reading and writing Matlab MAT files.

Versions Environment loading command (via Lmod)
1.5.26
GCCcore/13.2.0 MATIO/1.5.26

MBROLA

MBROLA is a speech synthesizer based on the concatenation of diphones. It takes a list of phonemes as input, together with prosodic information (duration of phonemes and a piecewise linear description of pitch), and produces speech samples on 16 bits (linear), at the sampling frequency of the diphone database. MBROLA voices project provides list of MBROLA speech synthesizer voices. It is intended to provide easier collaboration and automatic updates for individual users and packagers.

Versions Environment loading command (via Lmod)
3.3-voices-20200330
GCCcore/13.2.0 MBROLA/3.3-voices-20200330

MDI

The MolSSI Driver Interface (MDI) project provides a standardized API for fast, on-the-fly communication between computational chemistry codes. This greatly simplifies the process of implementing methods that require the cooperation of multiple software packages and enables developers to write a single implementation that works across many different codes. The API is sufficiently general to support a wide variety of techniques, including QM/MM, ab initio MD, machine learning, advanced sampling, and path integral MD, while also being straightforwardly extensible. Communication between codes is handled by the MDI Library, which enables tight coupling between codes using either the MPI or TCP/IP methods.

Versions Environment loading command (via Lmod)
1.4.29
GCC/14.3.0 OpenMPI/5.0.8 MDI/1.4.29

ML-bundle

Bundle of modules for ML

Versions Environment loading command (via Lmod)
25.10
ML-bundle/25.10
25.04
ML-bundle/25.04
24.06a
ML-bundle/24.06a

MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

Versions Environment loading command (via Lmod)
18-8cc5c-CUDA-12.9.1
GCCcore/14.3.0 MMseqs2/18-8cc5c-CUDA-12.9.1
17-b804f-CUDA-12.8.0
GCCcore/13.2.0 MMseqs2/17-b804f-CUDA-12.8.0

Mako

A super-fast templating language that borrows the best ideas from the existing templating languages

Versions Environment loading command (via Lmod)
1.3.10
GCCcore/14.3.0 Mako/1.3.10
1.2.4
Mako/1.2.4
1.2.4
GCCcore/13.2.0 Mako/1.2.4

Mesa

Mesa is an open-source implementation of the OpenGL specification - a system for rendering interactive 3D graphics.

Versions Environment loading command (via Lmod)
23.1.9
Mesa/23.1.9
23.1.9
GCCcore/13.2.0 Mesa/23.1.9

Meson

Meson is a cross-platform build system designed to be both as fast and as user friendly as possible.

Versions Environment loading command (via Lmod)
1.8.2
GCCcore/14.3.0 Meson/1.8.2
1.4.0
GCCcore/13.2.0 Meson/1.4.0
1.2.3
Meson/1.2.3
1.2.3
GCCcore/13.2.0 Meson/1.2.3

MinIO-Client

MinIO Client (mc) provides a modern alternative to UNIX commands like ls, cat, cp, mirror, diff, find etc. It supports filesystems and Amazon S3 compatible cloud storage service (AWS Signature v2 and v4).

Versions Environment loading command (via Lmod)
2024-07-31T15-58-33Z
MinIO-Client/2024-07-31T15-58-33Z

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems.

Versions Environment loading command (via Lmod)
3.0-CUDA-12.8.0-gpuresident
GCC/12.3.0 NAMD/3.0-CUDA-12.8.0-gpuresident

NASM

NASM: General-purpose x86 assembler

Versions Environment loading command (via Lmod)
2.16.03
GCCcore/14.3.0 NASM/2.16.03
2.16.01
NASM/2.16.01
2.16.01
GCCcore/13.2.0 NASM/2.16.01

NCCL

The NVIDIA Collective Communications Library (NCCL) implements multi-GPU and multi-node collective communication primitives that are performance optimized for NVIDIA GPUs.

Versions Environment loading command (via Lmod)
2.29.3-CUDA-12.9.1
GCCcore/14.3.0 NCCL/2.29.3-CUDA-12.9.1
2.27.7-CUDA-12.9.1
GCCcore/14.3.0 NCCL/2.27.7-CUDA-12.9.1
2.26.2-CUDA-12.8.0
GCCcore/13.2.0 NCCL/2.26.2-CUDA-12.8.0
2.25.1-CUDA-12.9.1
GCCcore/14.3.0 NCCL/2.25.1-CUDA-12.9.1
2.25.1-CUDA-12.8.0
GCCcore/13.2.0 NCCL/2.25.1-CUDA-12.8.0
2.25.1-CUDA-12.4.0
GCCcore/13.2.0 NCCL/2.25.1-CUDA-12.4.0
2.20.5-CUDA-12.4.0
GCCcore/13.2.0 NCCL/2.20.5-CUDA-12.4.0

NSPR

Netscape Portable Runtime (NSPR) provides a platform-neutral API for system level and libc-like functions.

Versions Environment loading command (via Lmod)
4.37
GCCcore/14.3.0 NSPR/4.37
4.35
GCCcore/13.2.0 NSPR/4.35

NSS

Network Security Services (NSS) is a set of libraries designed to support cross-platform development of security-enabled client and server applications.

Versions Environment loading command (via Lmod)
3.114
GCCcore/14.3.0 NSS/3.114
3.94
GCCcore/13.2.0 NSS/3.94

NVHPC

C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI)

Versions Environment loading command (via Lmod)
25.9-CUDA-12.9.1
NVHPC/25.9-CUDA-12.9.1
24.5-CUDA-12.4.0
NVHPC/24.5-CUDA-12.4.0

NVPL

NVIDIA Performance Libraries (NVPL) are a collection of essential mathematical libraries optimized for Arm 64-bit architectures. NVPL allows you to easily port HPC applications to NVIDIA Grace CPU platforms to achieve industry-leading performance and efficiency.

Versions Environment loading command (via Lmod)
25.5
NVPL/25.5
25.1
NVPL/25.1

Ninja

Ninja is a small build system with a focus on speed.

Versions Environment loading command (via Lmod)
1.13.0
GCCcore/14.3.0 Ninja/1.13.0
1.11.1
Ninja/1.11.1
1.11.1
GCCcore/13.2.0 Ninja/1.11.1

OSU-Micro-Benchmarks

OSU Micro-Benchmarks

Versions Environment loading command (via Lmod)
7.4-CUDA-12.4.0
GCC/13.2.0 OpenMPI/5.0.3 OSU-Micro-Benchmarks/7.4-CUDA-12.4.0
7.4
GCC/13.2.0 OpenMPI/5.0.3 OSU-Micro-Benchmarks/7.4

OpenBLAS

OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.

Versions Environment loading command (via Lmod)
0.3.30
llvm-compilers/20.1.8 OpenBLAS/0.3.30
0.3.30
GCC/14.3.0 OpenBLAS/0.3.30
0.3.24
GCC/13.2.0 OpenBLAS/0.3.24

OpenEXR

OpenEXR is a high dynamic-range (HDR) image file format developed by Industrial Light & Magic for use in computer imaging applications

Versions Environment loading command (via Lmod)
3.2.0
GCCcore/13.2.0 OpenEXR/3.2.0

OpenGL

Open Graphics Library (OpenGL) is a cross-language, cross-platform application programming interface (API) for rendering 2D and 3D vector graphics. This module is a bundle of software required for OpenGL rendering. It provides Mesa as an open-source implementation of the OpenGL specification with software rendering and AMD GPU support, libglvnd for a vendor neutral dispatch layer for rendering with both NVIDIA GPUs & Mesa, Mesa-demos for sample applications, and GLU as an computer graphics library utilizing OpenGL.

Versions Environment loading command (via Lmod)
2025.09
GCCcore/14.3.0 OpenGL/2025.09

OpenJPEG

OpenJPEG is an open-source JPEG 2000 codec written in C language. It has been developed in order to promote the use of JPEG 2000, a still-image compression standard from the Joint Photographic Experts Group (JPEG). Since may 2015, it is officially recognized by ISO/IEC and ITU-T as a JPEG 2000 Reference Software.

Versions Environment loading command (via Lmod)
2.5.0
GCCcore/13.2.0 OpenJPEG/2.5.0

OpenMM

OpenMM is a toolkit for molecular simulation.

Versions Environment loading command (via Lmod)
8.2.0-CUDA-12.8.0
GCC/13.2.0 OpenMPI/5.0.3 OpenMM/8.2.0-CUDA-12.8.0

OpenMPI

The Open MPI Project is an open source MPI-3 implementation.

Versions Environment loading command (via Lmod)
5.0.8-CUDA-12.9.1
GCC/14.3.0 OpenMPI/5.0.8-CUDA-12.9.1
5.0.8-CUDA-12.8.0
GCC/13.2.0 OpenMPI/5.0.8-CUDA-12.8.0
5.0.8
nvidia-compilers/25.9-CUDA-12.9.1 OpenMPI/5.0.8
5.0.8
NVHPC/25.9-CUDA-12.9.1 OpenMPI/5.0.8
5.0.8
llvm-compilers/20.1.8 OpenMPI/5.0.8
5.0.8
GCC/14.3.0 OpenMPI/5.0.8
5.0.3
NVHPC/24.5-CUDA-12.4.0 OpenMPI/5.0.3
5.0.3
GCC/13.2.0 OpenMPI/5.0.3

OpenPGM

OpenPGM is an open source implementation of the Pragmatic General Multicast (PGM) specification in RFC 3208 available at www.ietf.org. PGM is a reliable and scalable multicast protocol that enables receivers to detect loss, request retransmission of lost data, or notify an application of unrecoverable loss. PGM is a receiver-reliable protocol, which means the receiver is responsible for ensuring all data is received, absolving the sender of reception responsibility.

Versions Environment loading command (via Lmod)
5.2.122
GCCcore/14.3.0 OpenPGM/5.2.122
5.2.122
GCCcore/13.2.0 OpenPGM/5.2.122

OpenSSL

The OpenSSL Project is a collaborative effort to develop a robust, commercial-grade, full-featured, and Open Source toolchain implementing the Secure Sockets Layer (SSL v2/v3) and Transport Layer Security (TLS v1) protocols as well as a full-strength general purpose cryptography library.

Versions Environment loading command (via Lmod)
3
OpenSSL/3
1.1
OpenSSL/1.1

OpenSlide

OpenSlide is a C library that provides a simple interface to read whole-slide images (also known as virtual slides).

Versions Environment loading command (via Lmod)
4.0.0
GCCcore/13.2.0 OpenSlide/4.0.0

PCRE

The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.

Versions Environment loading command (via Lmod)
8.45
GCCcore/14.3.0 PCRE/8.45

PCRE2

The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.

Versions Environment loading command (via Lmod)
10.45
GCCcore/14.3.0 PCRE2/10.45
10.42
GCCcore/13.2.0 PCRE2/10.42

PLUMED

PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines. Free energy calculations can be performed as a function of many order parameters with a particular focus on biological problems, using state of the art methods such as metadynamics, umbrella sampling and Jarzynski-equation based steered MD. The software, written in C++, can be easily interfaced with both fortran and C/C++ codes.

Versions Environment loading command (via Lmod)
2.9.4
GCC/14.3.0 OpenMPI/5.0.8 PLUMED/2.9.4

PMIx

Process Management for Exascale Environments PMI Exascale (PMIx) represents an attempt to provide an extended version of the PMI standard specifically designed to support clusters up to and including exascale sizes. The overall objective of the project is not to branch the existing pseudo-standard definitions - in fact, PMIx fully supports both of the existing PMI-1 and PMI-2 APIs - but rather to (a) augment and extend those APIs to eliminate some current restrictions that impact scalability, and (b) provide a reference implementation of the PMI-server that demonstrates the desired level of scalability.

Versions Environment loading command (via Lmod)
5.0.8
GCCcore/14.3.0 PMIx/5.0.8

PRRTE

PRRTE is the PMIx Reference RunTime Environment

Versions Environment loading command (via Lmod)
3.0.11
GCCcore/14.3.0 PRRTE/3.0.11

Pango

Pango is a library for laying out and rendering of text, with an emphasis on internationalization. Pango can be used anywhere that text layout is needed, though most of the work on Pango so far has been done in the context of the GTK+ widget toolkit. Pango forms the core of text and font handling for GTK+-2.x.

Versions Environment loading command (via Lmod)
1.51.0
GCCcore/13.2.0 Pango/1.51.0

Perl

Larry Wall's Practical Extraction and Report Language Includes a small selection of extra CPAN packages for core functionality.

Versions Environment loading command (via Lmod)
5.40.2
GCCcore/14.3.0 Perl/5.40.2
5.38.0
Perl/5.38.0
5.38.0
GCCcore/13.2.0 Perl/5.38.0

Perl-bundle-CPAN

A set of common packages from CPAN

Versions Environment loading command (via Lmod)
5.40.2
GCCcore/14.3.0 Perl-bundle-CPAN/5.40.2
5.38.0
Perl-bundle-CPAN/5.38.0
5.38.0
GCCcore/13.2.0 Perl-bundle-CPAN/5.38.0

Pillow

Pillow is the 'friendly PIL fork' by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lundh and Contributors.

Versions Environment loading command (via Lmod)
10.2.0
GCCcore/13.2.0 Pillow/10.2.0

PnetCDF

Parallel netCDF: A Parallel I/O Library for NetCDF File Access

Versions Environment loading command (via Lmod)
1.12.3
GCC/13.2.0 OpenMPI/5.0.3 PnetCDF/1.12.3

PostgreSQL

PostgreSQL is a powerful, open source object-relational database system. It is fully ACID compliant, has full support for foreign keys, joins, views, triggers, and stored procedures (in multiple languages). It includes most SQL:2008 data types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and TIMESTAMP. It also supports storage of binary large objects, including pictures, sounds, or video. It has native programming interfaces for C/C++, Java, .Net, Perl, Python, Ruby, Tcl, ODBC, among others, and exceptional documentation.

Versions Environment loading command (via Lmod)
17.5
GCCcore/14.3.0 PostgreSQL/17.5
16.1
GCCcore/13.2.0 PostgreSQL/16.1

PyYAML

PyYAML is a YAML parser and emitter for the Python programming language.

Versions Environment loading command (via Lmod)
6.0.2
GCCcore/14.3.0 PyYAML/6.0.2
6.0.1
GCCcore/13.2.0 PyYAML/6.0.1

PyZMQ

Python bindings for ZeroMQ

Versions Environment loading command (via Lmod)
27.1.0
GCCcore/14.3.0 PyZMQ/27.1.0
25.1.2
GCCcore/13.2.0 PyZMQ/25.1.2

PycURL

PycURL is a Python interface to libcurl. PycURL can be used to fetch objects identified by a URL from a Python program, similar to the urllib Python module. PycURL is mature, very fast, and supports a lot of features.

Versions Environment loading command (via Lmod)
7.45.7
GCCcore/14.3.0 PycURL/7.45.7
7.45.3
GCCcore/13.2.0 PycURL/7.45.3

Python

Python is a programming language that lets you work more quickly and integrate your systems more effectively.

Versions Environment loading command (via Lmod)
3.13.5
GCCcore/14.3.0 Python/3.13.5
3.11.5
Python/3.11.5
3.11.5
GCCcore/13.2.0 Python/3.11.5

Python-DVUploader

No description available

Versions Environment loading command (via Lmod)
0.3.1
Python-DVUploader/0.3.1

Python-bundle-PyPI

Bundle of Python packages from PyPI

Versions Environment loading command (via Lmod)
2025.07
GCCcore/14.3.0 Python-bundle-PyPI/2025.07
2023.10
GCCcore/13.2.0 Python-bundle-PyPI/2023.10

Qhull

Qhull computes the convex hull, Delaunay triangulation, Voronoi diagram, halfspace intersection about a point, furthest-site Delaunay triangulation, and furthest-site Voronoi diagram. The source code runs in 2-d, 3-d, 4-d, and higher dimensions. Qhull implements the Quickhull algorithm for computing the convex hull.

Versions Environment loading command (via Lmod)
2020.2
GCCcore/13.2.0 Qhull/2020.2

Qt6

Qt is a comprehensive cross-platform C++ application framework.

Versions Environment loading command (via Lmod)
6.9.3
GCCcore/14.3.0 Qt6/6.9.3

Rust

Rust is a systems programming language that runs blazingly fast, prevents segfaults, and guarantees thread safety.

Versions Environment loading command (via Lmod)
1.88.0
GCCcore/14.3.0 Rust/1.88.0
1.73.0
GCCcore/13.2.0 Rust/1.73.0

S-Lang

S-Lang is a multi-platform programmer's library designed to allow a developer to create robust multi-platform software. It provides facilities required by interactive applications such as display/screen management, keyboard input, keymaps, and so on.

Versions Environment loading command (via Lmod)
2.3.0
S-Lang/2.3.0

SDL2

SDL: Simple DirectMedia Layer, a cross-platform multimedia library

Versions Environment loading command (via Lmod)
2.32.10
GCCcore/14.3.0 SDL2/2.32.10
2.28.5
GCCcore/13.2.0 SDL2/2.28.5

SQLAlchemy

SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that gives application developers the full power and flexibility of SQL. SQLAlchemy provides a full suite of well known enterprise-level persistence patterns, designed for efficient and high-performing database access, adapted into a simple and Pythonic domain language.

Versions Environment loading command (via Lmod)
2.0.41
GCCcore/14.3.0 SQLAlchemy/2.0.41
2.0.29
GCCcore/13.2.0 SQLAlchemy/2.0.29

SQLite

SQLite: SQL Database Engine in a C Library

Versions Environment loading command (via Lmod)
3.50.1
GCCcore/14.3.0 SQLite/3.50.1
3.43.1
SQLite/3.43.1
3.43.1
GCCcore/13.2.0 SQLite/3.43.1

SWIG

SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.

Versions Environment loading command (via Lmod)
4.1.1
GCCcore/13.2.0 SWIG/4.1.1

ScaFaCoS

ScaFaCoS is a library of scalable fast coulomb solvers.

Versions Environment loading command (via Lmod)
1.0.4
GCC/14.3.0 OpenMPI/5.0.8 ScaFaCoS/1.0.4

ScaLAPACK

The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers.

Versions Environment loading command (via Lmod)
2.2.2-fb
llvm-compilers/20.1.8 OpenMPI/5.0.8 ScaLAPACK/2.2.2-fb
2.2.2-fb
GCC/14.3.0 OpenMPI/5.0.8 ScaLAPACK/2.2.2-fb
2.2.0-fb
NVHPC/24.5-CUDA-12.4.0 OpenMPI/5.0.3 ScaLAPACK/2.2.0-fb
2.2.0-fb
GCC/13.2.0 OpenMPI/5.0.3 ScaLAPACK/2.2.0-fb

SciPy-bundle

Bundle of Python packages for scientific software

Versions Environment loading command (via Lmod)
2025.07
GCC/14.3.0 SciPy-bundle/2025.07
2023.11
GCC/13.2.0 SciPy-bundle/2023.11

SoX

SoX is the Swiss Army Knife of sound processing utilities. It can convert audio files to other popular audio file types and also apply sound effects and filters during the conversion.

Versions Environment loading command (via Lmod)
14.4.2
GCCcore/14.3.0 SoX/14.4.2

Szip

Szip compression software, providing lossless compression of scientific data

Versions Environment loading command (via Lmod)
2.1.1
GCCcore/14.3.0 Szip/2.1.1
2.1.1
GCCcore/13.2.0 Szip/2.1.1

Tcl

Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.

Versions Environment loading command (via Lmod)
9.0.1
GCCcore/14.3.0 Tcl/9.0.1
8.6.13
Tcl/8.6.13
8.6.13
GCCcore/13.2.0 Tcl/8.6.13
8.6.13
GCCcore/12.3.0 Tcl/8.6.13

Tk

Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.

Versions Environment loading command (via Lmod)
8.6.13
GCCcore/13.2.0 Tk/8.6.13

Tkinter

Tkinter module, built with the Python buildsystem

Versions Environment loading command (via Lmod)
3.11.5
GCCcore/13.2.0 Tkinter/3.11.5

TurboVNC

TurboVNC is a derivative of VNC (Virtual Network Computing) that is tuned to provide peak performance for 3D and video workloads.

Versions Environment loading command (via Lmod)
3.1.4
TurboVNC/3.1.4

UCX

Unified Communication X An open-source production grade communication framework for data centric and high-performance applications

Versions Environment loading command (via Lmod)
1.19.0
GCCcore/14.3.0 UCX/1.19.0

UCX-CUDA

Unified Communication X An open-source production grade communication framework for data centric and high-performance applications This module adds the UCX CUDA support.

Versions Environment loading command (via Lmod)
1.19.0-CUDA-12.9.1
GCCcore/14.3.0 UCX-CUDA/1.19.0-CUDA-12.9.1

UnZip

UnZip is an extraction utility for archives compressed in .zip format (also called "zipfiles

Versions Environment loading command (via Lmod)
6.0
UnZip/6.0
6.0
GCCcore/14.3.0 UnZip/6.0
6.0
GCCcore/13.2.0 UnZip/6.0

VASP

The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from first principles.

Versions Environment loading command (via Lmod)
6.4.3
NVHPC/24.5-CUDA-12.4.0 OpenMPI/5.0.3 VASP/6.4.3

VSCode

Visual Studio Code is a lightweight but powerful source code editor which runs on your desktop and is available for Windows, macOS and Linux. It comes with built-in support for JavaScript, TypeScript and Node.js and has a rich ecosystem of extensions for other languages and runtimes (such as C++, C#, Java, Python, PHP, Go, .NET). Begin your journey with VS Code with these introductory videos.

Versions Environment loading command (via Lmod)
1.100
VSCode/1.100

VTK

The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization. VTK consists of a C++ class library and several interpreted interface layers including Tcl/Tk, Java, and Python. VTK supports a wide variety of visualization algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation.

Versions Environment loading command (via Lmod)
9.5.2
GCC/14.3.0 OpenMPI/5.0.8 VTK/9.5.2

Voro++

Voro++ is a software library for carrying out three-dimensional computations of the Voronoi tessellation. A distinguishing feature of the Voro++ library is that it carries out cell-based calculations, computing the Voronoi cell for each particle individually. It is particularly well-suited for applications that rely on cell-based statistics, where features of Voronoi cells (eg. volume, centroid, number of faces) can be used to analyze a system of particles.

Versions Environment loading command (via Lmod)
0.4.6
GCCcore/14.3.0 Voro++/0.4.6

Wannier90

A tool for obtaining maximally-localised Wannier functions

Versions Environment loading command (via Lmod)
3.1.0
NVHPC/24.5-CUDA-12.4.0 OpenMPI/5.0.3 Wannier90/3.1.0

Wayland

Wayland is a project to define a protocol for a compositor to talk to its clients as well as a library implementation of the protocol. The compositor can be a standalone display server running on Linux kernel modesetting and evdev input devices, an X application, or a wayland client itself. The clients can be traditional applications, X servers (rootless or fullscreen) or other display servers.

Versions Environment loading command (via Lmod)
1.24.0
GCCcore/14.3.0 Wayland/1.24.0
1.22.0
Wayland/1.22.0
1.22.0
GCCcore/13.2.0 Wayland/1.22.0

X11

The X Window System (X11) is a windowing system for bitmap displays

Versions Environment loading command (via Lmod)
20250608
GCCcore/14.3.0 X11/20250608
20231019
X11/20231019
20231019
GCCcore/13.2.0 X11/20231019

XZ

xz: XZ utilities

Versions Environment loading command (via Lmod)
5.8.1
GCCcore/14.3.0 XZ/5.8.1
5.4.4
XZ/5.4.4
5.4.4
GCCcore/13.2.0 XZ/5.4.4

Yasm

Yasm: Complete rewrite of the NASM assembler with BSD license

Versions Environment loading command (via Lmod)
1.3.0
GCCcore/14.3.0 Yasm/1.3.0
1.3.0
GCCcore/13.2.0 Yasm/1.3.0

Z3

Z3 is a theorem prover from Microsoft Research with support for bitvectors, booleans, arrays, floating point numbers, strings, and other data types. This module includes z3-solver, the Python interface of Z3.

Versions Environment loading command (via Lmod)
4.15.1
GCCcore/14.3.0 Z3/4.15.1
4.13.0
GCCcore/13.2.0 Z3/4.13.0

ZeroMQ

ZeroMQ looks like an embeddable networking library but acts like a concurrency framework. It gives you sockets that carry atomic messages across various transports like in-process, inter-process, TCP, and multicast. You can connect sockets N-to-N with patterns like fanout, pub-sub, task distribution, and request-reply. It's fast enough to be the fabric for clustered products. Its asynchronous I/O model gives you scalable multicore applications, built as asynchronous message-processing tasks. It has a score of language APIs and runs on most operating systems.

Versions Environment loading command (via Lmod)
4.3.5
GCCcore/14.3.0 ZeroMQ/4.3.5
4.3.5
GCCcore/13.2.0 ZeroMQ/4.3.5

aiohttp

Asynchronous HTTP client/server framework for asyncio and Python.

Versions Environment loading command (via Lmod)
3.12.15
GCCcore/14.3.0 aiohttp/3.12.15
3.9.5
GCCcore/13.2.0 aiohttp/3.9.5

alsa-lib

The Advanced Linux Sound Architecture (ALSA) provides audio and MIDI functionality to the Linux operating system.

Versions Environment loading command (via Lmod)
1.2.8
GCCcore/13.2.0 alsa-lib/1.2.8

archspec

A library for detecting, labeling, and reasoning about microarchitectures

Versions Environment loading command (via Lmod)
0.2.5
GCCcore/14.3.0 archspec/0.2.5

aria2

aria2 is a lightweight multi-protocol & multi-source command-line download utility.

Versions Environment loading command (via Lmod)
1.37.0
aria2/1.37.0

assimp

Open Asset Import Library (assimp) is a library to import and export various 3d-model-formats including scene-post-processing to generate missing render data.

Versions Environment loading command (via Lmod)
6.0.2
GCCcore/14.3.0 assimp/6.0.2

asyncssh

AsyncSSH is a Python package which provides an asynchronous client and server implementation of the SSHv2 protocol on top of the Python 3.6+ asyncio framework.

Versions Environment loading command (via Lmod)
2.21.1
GCCcore/14.3.0 asyncssh/2.21.1
2.14.2
GCCcore/13.2.0 asyncssh/2.14.2

at-spi2-atk

AT-SPI 2 toolkit bridge

Versions Environment loading command (via Lmod)
2.38.0
GCCcore/13.2.0 at-spi2-atk/2.38.0

at-spi2-core

Assistive Technology Service Provider Interface.

Versions Environment loading command (via Lmod)
2.50.0
GCCcore/13.2.0 at-spi2-core/2.50.0

aws-ofi-nccl

AWS OFI NCCL is a plug-in which enables EC2 developers to use libfabric as a network provider while running NVIDIA's NCCL based applications.

Versions Environment loading command (via Lmod)
1.18.0-CUDA-12.9.1
GCCcore/14.3.0 aws-ofi-nccl/1.18.0-CUDA-12.9.1
1.17.3-CUDA-12.8.0
GCCcore/13.2.0 aws-ofi-nccl/1.17.3-CUDA-12.8.0
1.16.3-CUDA-12.9.1
GCCcore/14.3.0 aws-ofi-nccl/1.16.3-CUDA-12.9.1
1.16.3-CUDA-12.8.0
GCCcore/13.2.0 aws-ofi-nccl/1.16.3-CUDA-12.8.0
1.14.0-CUDA-12.8.0
GCCcore/13.2.0 aws-ofi-nccl/1.14.0-CUDA-12.8.0
1.13.2-CUDA-12.4.0
GCCcore/13.2.0 aws-ofi-nccl/1.13.2-CUDA-12.4.0
1.9.2-CUDA-12.4.0
GCCcore/13.2.0 aws-ofi-nccl/1.9.2-CUDA-12.4.0

bcrypt

Acceptable password hashing for your software and your servers (but you should really use argon2id or scrypt)

Versions Environment loading command (via Lmod)
4.3.0
GCCcore/14.3.0 bcrypt/4.3.0
4.1.3
GCCcore/13.2.0 bcrypt/4.1.3

binutils

binutils: GNU binary utilities

Versions Environment loading command (via Lmod)
2.44
GCCcore/14.3.0 binutils/2.44
2.44
binutils/2.44
2.40
GCCcore/13.2.0 binutils/2.40
2.40
GCCcore/12.3.0 binutils/2.40
2.40
binutils/2.40

bzip2

bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression.

Versions Environment loading command (via Lmod)
1.0.8
GCCcore/14.3.0 bzip2/1.0.8
1.0.8
GCCcore/13.2.0 bzip2/1.0.8
1.0.8
bzip2/1.0.8

cURL

libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more.

Versions Environment loading command (via Lmod)
8.14.1
GCCcore/14.3.0 cURL/8.14.1
8.3.0
GCCcore/13.2.0 cURL/8.3.0
8.3.0
cURL/8.3.0

cairo

Cairo is a 2D graphics library with support for multiple output devices. Currently supported output targets include the X Window System (via both Xlib and XCB), Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. Experimental backends include OpenGL, BeOS, OS/2, and DirectFB

Versions Environment loading command (via Lmod)
1.18.4
GCCcore/14.3.0 cairo/1.18.4
1.18.0
GCCcore/13.2.0 cairo/1.18.0

cassini-headers

Header files for cassini driver (SlingShot) for CRAY libcxi

Versions Environment loading command (via Lmod)
13.0.0-144056f
cassini-headers/13.0.0-144056f
12.0.1-4d2c684
cassini-headers/12.0.1-4d2c684
12.0.1
cassini-headers/12.0.1

cffi

C Foreign Function Interface for Python. Interact with almost any C code from Python, based on C-like declarations that you can often copy-paste from header files or documentation.

Versions Environment loading command (via Lmod)
1.17.1
GCCcore/14.3.0 cffi/1.17.1
1.15.1
GCCcore/13.2.0 cffi/1.15.1

chronusq

The Chronus Quantum (ChronusQ) Software Package [v. Beta] is a high-performance computational chemistry software package with a strong emphasis on explicitly time-dependent and post-SCF quantum mechanical methods.

Versions Environment loading command (via Lmod)
0.8.0-364afa8-CUDA-12.9.1
llvm-compilers/20.1.8 chronusq/0.8.0-364afa8-CUDA-12.9.1

configurable-http-proxy

HTTP proxy for node.js including a REST API for updating the routing table. Developed as a part of the Jupyter Hub multi-user server.

Versions Environment loading command (via Lmod)
5.1.0
GCCcore/14.3.0 configurable-http-proxy/5.1.0
4.6.1
GCCcore/13.2.0 configurable-http-proxy/4.6.1

cppy

A small C++ header library which makes it easier to write Python extension modules. The primary feature is a PyObject smart pointer which automatically handles reference counting and provides convenience methods for performing common object operations.

Versions Environment loading command (via Lmod)
1.2.1
GCCcore/13.2.0 cppy/1.2.1

cryptography

cryptography is a package designed to expose cryptographic primitives and recipes to Python developers.

Versions Environment loading command (via Lmod)
45.0.5
GCCcore/14.3.0 cryptography/45.0.5
41.0.5
GCCcore/13.2.0 cryptography/41.0.5

cuDNN

The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for deep neural networks.

Versions Environment loading command (via Lmod)
9.19.1.2-CUDA-12.9.1
cuDNN/9.19.1.2-CUDA-12.9.1
9.15.0.57-CUDA-12.9.1
cuDNN/9.15.0.57-CUDA-12.9.1
9.10.1.4-CUDA-12.9.1
cuDNN/9.10.1.4-CUDA-12.9.1
9.2.1.18-CUDA-12.8.0
cuDNN/9.2.1.18-CUDA-12.8.0
9.2.1.18-CUDA-12.4.0
cuDNN/9.2.1.18-CUDA-12.4.0
8.9.7.29-CUDA-12.8.0
cuDNN/8.9.7.29-CUDA-12.8.0

cuSPARSELt

NVIDIA cuSPARSELt is a high-performance CUDA library dedicated to general matrix-matrix operations in which at least one operand is a sparse matrix

Versions Environment loading command (via Lmod)
0.8.1.1-CUDA-12.9.1
cuSPARSELt/0.8.1.1-CUDA-12.9.1
0.6.1.0-CUDA-12.9.1
cuSPARSELt/0.6.1.0-CUDA-12.9.1
0.6.1.0-CUDA-12.8.0
cuSPARSELt/0.6.1.0-CUDA-12.8.0
0.6.1.0-CUDA-12.4.0
cuSPARSELt/0.6.1.0-CUDA-12.4.0

cuTENSOR

The cuTENSOR Library is a GPU-accelerated tensor linear algebra library providing tensor contraction, reduction and elementwise operations.

Versions Environment loading command (via Lmod)
2.2.0.0-CUDA-12.8.0
cuTENSOR/2.2.0.0-CUDA-12.8.0

cxi-driver

Header files for cassini driver (SlingShot) for CRAY libcxi

Versions Environment loading command (via Lmod)
13.0.0
cxi-driver/13.0.0
12.0.1
cxi-driver/12.0.1

dorado

Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.

Versions Environment loading command (via Lmod)
0.9.6-CUDA-12.8.0
GCC/13.2.0 OpenMPI/5.0.3 dorado/0.9.6-CUDA-12.8.0

double-conversion

Efficient binary-decimal and decimal-binary conversion routines for IEEE doubles.

Versions Environment loading command (via Lmod)
3.3.1
GCCcore/14.3.0 double-conversion/3.3.1
3.3.0
GCCcore/13.2.0 double-conversion/3.3.0

eSpeak-NG

The eSpeak NG is a compact open source software text-to-speech synthesizer for Linux, Windows, Android and other operating systems. It supports more than 100 languages and accents. It is based on the eSpeak engine created by Jonathan Duddington.

Versions Environment loading command (via Lmod)
1.51
GCC/13.2.0 eSpeak-NG/1.51

elfutils

The elfutils project provides libraries and tools for ELF files and DWARF data.

Versions Environment loading command (via Lmod)
0.193
GCCcore/14.3.0 elfutils/0.193

expat

Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags).

Versions Environment loading command (via Lmod)
2.7.1
GCCcore/14.3.0 expat/2.7.1
2.5.0
GCCcore/13.2.0 expat/2.5.0
2.5.0
expat/2.5.0

ffnvcodec

FFmpeg nvidia headers. Adds support for nvenc and nvdec. Requires Nvidia GPU and drivers to be present (picked up dynamically).

Versions Environment loading command (via Lmod)
13.0.19.0
ffnvcodec/13.0.19.0
12.1.14.0
ffnvcodec/12.1.14.0

flex

Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text.

Versions Environment loading command (via Lmod)
2.6.4
GCCcore/14.3.0 flex/2.6.4
2.6.4
GCCcore/13.2.0 flex/2.6.4
2.6.4
GCCcore/12.3.0 flex/2.6.4
2.6.4
flex/2.6.4

flit

A simple packaging tool for simple packages.

Versions Environment loading command (via Lmod)
3.12.0
GCCcore/14.3.0 flit/3.12.0
3.9.0
GCCcore/13.2.0 flit/3.9.0

fontconfig

Fontconfig is a library designed to provide system-wide font configuration, customization and application access.

Versions Environment loading command (via Lmod)
2.17.0
GCCcore/14.3.0 fontconfig/2.17.0
2.14.2
GCCcore/13.2.0 fontconfig/2.14.2
2.14.2
fontconfig/2.14.2

fonttools

fontTools is a library for manipulating fonts, written in Python. The project includes the TTX tool, that can convert TrueType and OpenType fonts to and from an XML text format, which is also called TTX. It supports TrueType, OpenType, AFM and to an extent Type 1 and some Mac-specific formats.

Versions Environment loading command (via Lmod)
4.58.5
GCCcore/14.3.0 fonttools/4.58.5

foss

GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.

Versions Environment loading command (via Lmod)
2025b
foss/2025b
2023b
foss/2023b

freeglut

freeglut is a completely OpenSourced alternative to the OpenGL Utility Toolkit (GLUT) library.

Versions Environment loading command (via Lmod)
3.6.0
GCCcore/14.3.0 freeglut/3.6.0

freetype

FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well.

Versions Environment loading command (via Lmod)
2.13.3
GCCcore/14.3.0 freetype/2.13.3
2.13.2
GCCcore/13.2.0 freetype/2.13.2
2.13.2
freetype/2.13.2

gcc-system

The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).

Versions Environment loading command (via Lmod)
11.5.0
gcc-system/11.5.0

gettext

GNU 'gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation

Versions Environment loading command (via Lmod)
0.25
gettext/0.25
0.25
GCCcore/14.3.0 gettext/0.25
0.22
gettext/0.22
0.22
GCCcore/13.2.0 gettext/0.22

gfbf

GNU Compiler Collection (GCC) based compiler toolchain, including FlexiBLAS (BLAS and LAPACK support) and (serial) FFTW.

Versions Environment loading command (via Lmod)
2025b
gfbf/2025b
2023b
gfbf/2023b

giflib

giflib is a library for reading and writing gif images. It is API and ABI compatible with libungif which was in wide use while the LZW compression algorithm was patented.

Versions Environment loading command (via Lmod)
5.2.2
GCCcore/14.3.0 giflib/5.2.2
5.2.1
GCCcore/13.2.0 giflib/5.2.1

git

Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency.

Versions Environment loading command (via Lmod)
2.50.1
GCCcore/14.3.0 git/2.50.1
2.42.0
GCCcore/13.2.0 git/2.42.0

git-lfs

Git Large File Storage (LFS) replaces large files such as audio samples, videos, datasets, and graphics with text pointers inside Git, while storing the file contents on a remote server like GitHub.com

Versions Environment loading command (via Lmod)
3.5.1
git-lfs/3.5.1

glslang-SPIRV

Glslang is the official reference compiler front end for the OpenGL ES and OpenGL shading languages. It implements a strict interpretation of the specifications for these languages. It is open and free for anyone to use, either from a command line or programmatically. The OpenGL and OpenGL ES working groups are committed to maintaining consistency between the reference compiler and the corresponding shading language specifications.

Versions Environment loading command (via Lmod)
15.4.0
GCCcore/14.3.0 glslang-SPIRV/15.4.0

gompi

GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support.

Versions Environment loading command (via Lmod)
2025b
gompi/2025b
2023b
gompi/2023b

googletest

Google's framework for writing C++ tests on a variety of platforms

Versions Environment loading command (via Lmod)
1.14.0
GCCcore/13.2.0 googletest/1.14.0

gperf

GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. The hash function is perfect, which means that the hash table has no collisions, and the hash table lookup needs a single string comparison only.

Versions Environment loading command (via Lmod)
3.3
GCCcore/14.3.0 gperf/3.3
3.1
gperf/3.1
3.1
GCCcore/13.2.0 gperf/3.1

graphite2

Graphite is a "smart font" system developed specifically to handle the complexities of lesser-known languages of the world.

Versions Environment loading command (via Lmod)
1.3.14
GCCcore/14.3.0 graphite2/1.3.14
1.3.14
GCCcore/13.2.0 graphite2/1.3.14

groff

Groff (GNU troff) is a typesetting system that reads plain text mixed with formatting commands and produces formatted output.

Versions Environment loading command (via Lmod)
1.23.0
groff/1.23.0
1.23.0
GCCcore/14.3.0 groff/1.23.0
1.23.0
GCCcore/13.2.0 groff/1.23.0

gzip

gzip (GNU zip) is a popular data compression program as a replacement for compress

Versions Environment loading command (via Lmod)
1.14
GCCcore/14.3.0 gzip/1.14
1.13
gzip/1.13
1.13
GCCcore/13.2.0 gzip/1.13

hatch-jupyter-builder

Hatch Jupyter Builder is a plugin for the hatchling Python build backend. It is primarily targeted for package authors who are providing JavaScript as part of their Python packages. Typical use cases are Jupyter Lab Extensions and Jupyter Widgets.

Versions Environment loading command (via Lmod)
0.9.1
GCCcore/14.3.0 hatch-jupyter-builder/0.9.1
0.9.1
GCCcore/13.2.0 hatch-jupyter-builder/0.9.1

hatchling

Extensible, standards compliant build backend used by Hatch, a modern, extensible Python project manager.

Versions Environment loading command (via Lmod)
1.27.0
GCCcore/14.3.0 hatchling/1.27.0
1.18.0
GCCcore/13.2.0 hatchling/1.18.0

help2man

help2man produces simple manual pages from the '--help' and '--version' output of other commands.

Versions Environment loading command (via Lmod)
1.49.3
GCCcore/14.3.0 help2man/1.49.3
1.49.3
GCCcore/13.2.0 help2man/1.49.3
1.49.3
GCCcore/12.3.0 help2man/1.49.3

htop

An interactive process viewer for Unix

Versions Environment loading command (via Lmod)
3.3.0
htop/3.3.0

hwloc

The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently.

Versions Environment loading command (via Lmod)
2.12.1
GCCcore/14.3.0 hwloc/2.12.1
2.9.2
GCCcore/13.2.0 hwloc/2.9.2

hypothesis

Hypothesis is an advanced testing library for Python. It lets you write tests which are parametrized by a source of examples, and then generates simple and comprehensible examples that make your tests fail. This lets you find more bugs in your code with less work.

Versions Environment loading command (via Lmod)
6.136.6
GCCcore/14.3.0 hypothesis/6.136.6
6.90.0
GCCcore/13.2.0 hypothesis/6.90.0

intltool

intltool is a set of tools to centralize translation of many different file formats using GNU gettext-compatible PO files.

Versions Environment loading command (via Lmod)
0.51.0
intltool/0.51.0
0.51.0
GCCcore/14.3.0 intltool/0.51.0
0.51.0
GCCcore/13.2.0 intltool/0.51.0

jbigkit

JBIG-KIT is a software implementation of the JBIG1 data compression standard (ITU-T T.82), which was designed for bi-level image data, such as scanned documents.

Versions Environment loading command (via Lmod)
2.1
GCCcore/14.3.0 jbigkit/2.1
2.1
GCCcore/13.2.0 jbigkit/2.1

jedi

Jedi - an awesome autocompletion, static analysis and refactoring library for Python.

Versions Environment loading command (via Lmod)
0.19.2
GCCcore/14.3.0 jedi/0.19.2
0.19.1
GCCcore/13.2.0 jedi/0.19.1

jemalloc

jemalloc is a general purpose malloc(3) implementation that emphasizes fragmentation avoidance and scalable concurrency support.

Versions Environment loading command (via Lmod)
5.3.0
GCCcore/13.2.0 jemalloc/5.3.0

json-c

JSON-C implements a reference counting object model that allows you to easily construct JSON objects in C, output them as JSON formatted strings and parse JSON formatted strings back into the C representation of JSON objects.

Versions Environment loading command (via Lmod)
0.17
json-c/0.17
0.17
GCCcore/13.2.0 json-c/0.17

jupyter-code-proxy

Plugin for jupyter-server-proxy to run an instance of Visual Studio Code Server from JupyterLab.

Versions Environment loading command (via Lmod)
1.0.0
GCCcore/14.3.0 jupyter-code-proxy/1.0.0

jupyter-resource-usage

Jupyter Notebook Extension for monitoring your own Resource Usage (memory and/or CPU)

Versions Environment loading command (via Lmod)
1.2.0
GCCcore/14.3.0 jupyter-resource-usage/1.2.0

jupyter-server

The Jupyter Server provides the backend (i.e. the core services, APIs, and REST endpoints) for Jupyter web applications like Jupyter notebook, JupyterLab, and Voila.

Versions Environment loading command (via Lmod)
2.17.0
GCCcore/14.3.0 jupyter-server/2.17.0
2.14.0
GCCcore/13.2.0 jupyter-server/2.14.0

jupyter-server-proxy

Jupyter Server Proxy lets you run arbitrary external processes (such as RStudio, Shiny Server, Syncthing, PostgreSQL, Code Server, etc) alongside your notebook server and provide authenticated web access to them using a path like /rstudio next to others like /lab. Alongside the python package that provides the main functionality, the JupyterLab extension (@jupyterlab/server-proxy) provides buttons in the JupyterLab launcher window to get to RStudio for example.

Versions Environment loading command (via Lmod)
4.4.0
GCCcore/14.3.0 jupyter-server-proxy/4.4.0
4.1.2
GCCcore/13.2.0 jupyter-server-proxy/4.1.2

jupyterlab_nvdashboard

NVDashboard is a JupyterLab extension for displaying GPU usage dashboards. It enables JupyterLab users to visualize system hardware metrics within the same interactive environment they use for development. Supported metrics include: GPU-compute utilization, GPU-memory consumption, PCIe throughput and NVLink throughput

Versions Environment loading command (via Lmod)
0.13.0
GCCcore/14.3.0 jupyterlab_nvdashboard/0.13.0
0.11.0
GCCcore/13.2.0 jupyterlab_nvdashboard/0.11.0

jupyterlmod

Jupyter interactive notebook server extension that allows users to interact with environment modules before launching kernels. The extension uses Lmod's Python interface to accomplish module-related tasks like loading, unloading, saving collections, etc.

Versions Environment loading command (via Lmod)
5.3.0
GCCcore/14.3.0 jupyterlmod/5.3.0
5.2.1
GCCcore/13.2.0 jupyterlmod/5.2.1

kim-api

Open Knowledgebase of Interatomic Models. KIM is an API and OpenKIM is a collection of interatomic models (potentials) for atomistic simulations. This is a library that can be used by simulation programs to get access to the models in the OpenKIM database. This EasyBuild only installs the API, the models can be installed with the package openkim-models, or the user can install them manually by running kim-api-collections-management install user MODELNAME or kim-api-collections-management install user OpenKIM to install them all.

Versions Environment loading command (via Lmod)
2.4.1
GCC/14.3.0 kim-api/2.4.1

kineto

A CPU+GPU Profiling library that provides access to timeline traces and hardware performance counters

Versions Environment loading command (via Lmod)
0.4.0
GCC/13.2.0 kineto/0.4.0

lfbf

LLVM based compiler toolchain, including FlexiBLAS (BLAS and LAPACK support) and (serial) FFTW.

Versions Environment loading command (via Lmod)
2025b
lfbf/2025b

lfoss

GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.

Versions Environment loading command (via Lmod)
2025b
lfoss/2025b

libGLU

The OpenGL Utility Library (GLU) is a computer graphics library for OpenGL.

Versions Environment loading command (via Lmod)
9.0.3
libGLU/9.0.3

libaec

Libaec provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples). The library achieves best results for low entropy data as often encountered in space imaging instrument data or numerical model output from weather or climate simulations. While floating point representations are not directly supported, they can also be efficiently coded by grouping exponents and mantissa.

Versions Environment loading command (via Lmod)
1.1.4
GCCcore/14.3.0 libaec/1.1.4
1.0.6
GCCcore/13.2.0 libaec/1.0.6

libarchive

Multi-format archive and compression library

Versions Environment loading command (via Lmod)
3.8.1
GCCcore/14.3.0 libarchive/3.8.1
3.7.2
libarchive/3.7.2
3.7.2
GCCcore/13.2.0 libarchive/3.7.2

libclc

libclc is an open source, BSD/MIT dual licensed implementation of the library requirements of the OpenCL C programming language, as specified by the OpenCL 1.1 Specification.

Versions Environment loading command (via Lmod)
20.1.8
GCCcore/14.3.0 libclc/20.1.8

libconfig

Libconfig is a simple library for processing structured configuration files

Versions Environment loading command (via Lmod)
1.7.3
libconfig/1.7.3
1.7.3
GCCcore/13.2.0 libconfig/1.7.3

libcxi

libuv is a multi-platform support library with a focus on asynchronous I/O.

Versions Environment loading command (via Lmod)
12.0.1-CUDA-12.8.0
GCCcore/13.2.0 libcxi/12.0.1-CUDA-12.8.0
1.0.2-SHS-13.1.0
libcxi/1.0.2-SHS-13.1.0
1.0.2
libcxi/1.0.2

libde265

libde265 is an open source implementation of the h.265 video codec

Versions Environment loading command (via Lmod)
1.0.16
GCCcore/14.3.0 libde265/1.0.16

libdeflate

Heavily optimized library for DEFLATE/zlib/gzip compression and decompression.

Versions Environment loading command (via Lmod)
1.24
GCCcore/14.3.0 libdeflate/1.24
1.19
GCCcore/13.2.0 libdeflate/1.19

libdrm

Direct Rendering Manager runtime library.

Versions Environment loading command (via Lmod)
2.4.125
GCCcore/14.3.0 libdrm/2.4.125
2.4.117
libdrm/2.4.117
2.4.117
GCCcore/13.2.0 libdrm/2.4.117

libepoxy

Epoxy is a library for handling OpenGL function pointer management for you

Versions Environment loading command (via Lmod)
1.5.10
GCCcore/13.2.0 libepoxy/1.5.10

libevent

The libevent API provides a mechanism to execute a callback function when a specific event occurs on a file descriptor or after a timeout has been reached. Furthermore, libevent also support callbacks due to signals or regular timeouts.

Versions Environment loading command (via Lmod)
2.1.12
libevent/2.1.12
2.1.12
GCCcore/14.3.0 libevent/2.1.12
2.1.12
GCCcore/13.2.0 libevent/2.1.12

libfabric

Libfabric is a core component of OFI. It is the library that defines and exports the user-space API of OFI, and is typically the only software that applications deal with directly. It works in conjunction with provider libraries, which are often integrated directly into libfabric.

Versions Environment loading command (via Lmod)
2.3.1-SHS-13.1.0
libfabric/2.3.1-SHS-13.1.0
2.3.0-CUDA-12.8.0
GCCcore/13.2.0 libfabric/2.3.0-CUDA-12.8.0
2.2.0rc1
libfabric/2.2.0rc1
2.2.0-CUDA-12.8.0
GCCcore/13.2.0 libfabric/2.2.0-CUDA-12.8.0
2.1.0-CUDA-12.8.0
GCCcore/13.2.0 libfabric/2.1.0-CUDA-12.8.0
1.22.0
libfabric/1.22.0

libffi

The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time.

Versions Environment loading command (via Lmod)
3.5.1
GCCcore/14.3.0 libffi/3.5.1
3.4.4
libffi/3.4.4
3.4.4
GCCcore/13.2.0 libffi/3.4.4
3.2.1
libffi/3.2.1

libgd

GD is an open source code library for the dynamic creation of images by programmers.

Versions Environment loading command (via Lmod)
2.3.3
GCCcore/13.2.0 libgd/2.3.3

libglvnd

libglvnd is a vendor-neutral dispatch layer for arbitrating OpenGL API calls between multiple vendors.

Versions Environment loading command (via Lmod)
1.7.0
libglvnd/1.7.0
1.7.0
GCCcore/13.2.0 libglvnd/1.7.0

libheif

libheif is an HEIF and AVIF file format decoder and encoder

Versions Environment loading command (via Lmod)
1.20.2
GCCcore/14.3.0 libheif/1.20.2

libiconv

Libiconv converts from one character encoding to another through Unicode conversion

Versions Environment loading command (via Lmod)
1.18
GCCcore/14.3.0 libiconv/1.18
1.17
libiconv/1.17
1.17
GCCcore/13.2.0 libiconv/1.17

libidn2

Libidn2 implements the revised algorithm for internationalized domain names called IDNA2008/TR46.

Versions Environment loading command (via Lmod)
2.3.8
GCCcore/14.3.0 libidn2/2.3.8

libjpeg-turbo

libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding.

Versions Environment loading command (via Lmod)
3.1.1
GCCcore/14.3.0 libjpeg-turbo/3.1.1
3.0.1
libjpeg-turbo/3.0.1
3.0.1
GCCcore/13.2.0 libjpeg-turbo/3.0.1

libmad

MAD is a high-quality MPEG audio decoder.

Versions Environment loading command (via Lmod)
0.15.1b
GCCcore/14.3.0 libmad/0.15.1b

libnl

The libnl suite is a collection of libraries providing APIs to netlink protocol based Linux kernel interfaces.

Versions Environment loading command (via Lmod)
3.2.25
GCCcore/13.2.0 libnl/3.2.25

libogg

Ogg is a multimedia container format, and the native file and stream format for the Xiph.org multimedia codecs.

Versions Environment loading command (via Lmod)
1.3.6
GCCcore/14.3.0 libogg/1.3.6
1.3.5
GCCcore/13.2.0 libogg/1.3.5

libopus

Opus is a totally open, royalty-free, highly versatile audio codec. Opus is unmatched for interactive speech and music transmission over the Internet, but is also intended for storage and streaming applications. It is standardized by the Internet Engineering Task Force (IETF) as RFC 6716 which incorporated technology from Skype’s SILK codec and Xiph.Org’s CELT codec.

Versions Environment loading command (via Lmod)
1.5.2
GCCcore/14.3.0 libopus/1.5.2
1.4
GCCcore/13.2.0 libopus/1.4

libpciaccess

Generic PCI access library.

Versions Environment loading command (via Lmod)
0.18.1
GCCcore/14.3.0 libpciaccess/0.18.1
0.17
libpciaccess/0.17
0.17
GCCcore/13.2.0 libpciaccess/0.17

libpng

libpng is the official PNG reference library

Versions Environment loading command (via Lmod)
1.6.52
libpng/1.6.52
1.6.51
libpng/1.6.51
1.6.51
GCCcore/14.3.0 libpng/1.6.51
1.6.51
GCCcore/13.2.0 libpng/1.6.51
1.6.50.lua
GCCcore/14.3.0 libpng/1.6.50.lua
1.6.50
GCCcore/14.3.0 libpng/1.6.50
1.6.40.lua
libpng/1.6.40.lua
1.6.40.lua
GCCcore/13.2.0 libpng/1.6.40.lua
1.6.40
libpng/1.6.40
1.6.40
GCCcore/13.2.0 libpng/1.6.40

libpsl

C library for the Public Suffix List

Versions Environment loading command (via Lmod)
0.21.5
GCCcore/14.3.0 libpsl/0.21.5

libreadline

The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands.

Versions Environment loading command (via Lmod)
8.2
libreadline/8.2
8.2
GCCcore/14.3.0 libreadline/8.2
8.2
GCCcore/13.2.0 libreadline/8.2
8.0
libreadline/8.0
7.0
libreadline/7.0

libsndfile

Libsndfile is a C library for reading and writing files containing sampled sound (such as MS Windows WAV and the Apple/SGI AIFF format) through one standard library interface.

Versions Environment loading command (via Lmod)
1.2.2
GCCcore/14.3.0 libsndfile/1.2.2
1.2.2
GCCcore/13.2.0 libsndfile/1.2.2

libsodium

Sodium is a modern, easy-to-use software library for encryption, decryption, signatures, password hashing and more.

Versions Environment loading command (via Lmod)
1.0.20
GCCcore/14.3.0 libsodium/1.0.20
1.0.19
GCCcore/13.2.0 libsodium/1.0.19

libtirpc

Libtirpc is a port of Suns Transport-Independent RPC library to Linux.

Versions Environment loading command (via Lmod)
1.3.4
GCCcore/13.2.0 libtirpc/1.3.4

libtommath

LibTomMath is a free open source portable number theoretic multiple-precision integer (MPI) library written entirely in C.

Versions Environment loading command (via Lmod)
1.3.0
GCCcore/14.3.0 libtommath/1.3.0

libtool

GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface.

Versions Environment loading command (via Lmod)
2.5.4
GCCcore/14.3.0 libtool/2.5.4
2.4.7
libtool/2.4.7
2.4.7
GCCcore/13.2.0 libtool/2.4.7

libunistring

This library provides functions for manipulating Unicode strings and for manipulating C strings according to the Unicode standard.

Versions Environment loading command (via Lmod)
1.3
GCCcore/14.3.0 libunistring/1.3

libunwind

The primary goal of libunwind is to define a portable and efficient C programming interface (API) to determine the call-chain of a program. The API additionally provides the means to manipulate the preserved (callee-saved) state of each call-frame and to resume execution at any point in the call-chain (non-local goto). The API supports both local (same-process) and remote (across-process) operation. As such, the API is useful in a number of applications

Versions Environment loading command (via Lmod)
1.8.2
GCCcore/14.3.0 libunwind/1.8.2
1.6.2
libunwind/1.6.2
1.6.2
GCCcore/13.2.0 libunwind/1.6.2

libuv

libuv is a multi-platform support library with a focus on asynchronous I/O.

Versions Environment loading command (via Lmod)
1.48.0
libuv/1.48.0
1.48.0
GCCcore/13.2.0 libuv/1.48.0

libvips

libvips is a demand-driven, horizontally threaded image processing library.

Versions Environment loading command (via Lmod)
8.16.1
GCC/13.2.0 libvips/8.16.1

libvorbis

Ogg Vorbis is a fully open, non-proprietary, patent-and-royalty-free, general-purpose compressed audio format

Versions Environment loading command (via Lmod)
1.3.7
GCCcore/14.3.0 libvorbis/1.3.7
1.3.7
GCCcore/13.2.0 libvorbis/1.3.7

libwebp

WebP is a modern image format that provides superior lossless and lossy compression for images on the web. Using WebP, webmasters and web developers can create smaller, richer images that make the web faster.

Versions Environment loading command (via Lmod)
1.5.0
GCCcore/14.3.0 libwebp/1.5.0
1.3.2
GCCcore/13.2.0 libwebp/1.3.2

libxc

Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals.

Versions Environment loading command (via Lmod)
6.2.2-disable-fhc
NVHPC/24.5-CUDA-12.4.0 libxc/6.2.2-disable-fhc

libxml2

Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform).

Versions Environment loading command (via Lmod)
2.14.3
GCCcore/14.3.0 libxml2/2.14.3
2.11.5
libxml2/2.11.5
2.11.5
GCCcore/13.2.0 libxml2/2.11.5

libxslt

Libxslt is the XSLT C library developed for the GNOME project (but usable outside of the Gnome platform).

Versions Environment loading command (via Lmod)
1.1.43
GCCcore/14.3.0 libxslt/1.1.43
1.1.38
GCCcore/13.2.0 libxslt/1.1.38

libyaml

LibYAML is a YAML parser and emitter written in C.

Versions Environment loading command (via Lmod)
0.2.5
GCCcore/14.3.0 libyaml/0.2.5
0.2.5
GCCcore/13.2.0 libyaml/0.2.5

lit

lit is a portable tool for executing LLVM and Clang style test suites, summarizing their results, and providing indication of failures.

Versions Environment loading command (via Lmod)
18.1.8
GCCcore/14.3.0 lit/18.1.8
18.1.7
GCCcore/13.2.0 lit/18.1.7

llvm-compilers

The LLVM Project is a collection of modular and reusable compiler and toolchain technologies.

Versions Environment loading command (via Lmod)
20.1.8
llvm-compilers/20.1.8

lm-sensors

libuv is a multi-platform support library with a focus on asynchronous I/O.

Versions Environment loading command (via Lmod)
3.6.0
GCCcore/13.2.0 lm-sensors/3.6.0

lompi

LLVM based compiler toolchain, including OpenMPI for MPI support.

Versions Environment loading command (via Lmod)
2025b
lompi/2025b

lxml

The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt.

Versions Environment loading command (via Lmod)
6.0.0
GCCcore/14.3.0 lxml/6.0.0
4.9.3
GCCcore/13.2.0 lxml/4.9.3

lz4

LZ4 is lossless compression algorithm, providing compression speed at 400 MB/s per core. It features an extremely fast decoder, with speed in multiple GB/s per core.

Versions Environment loading command (via Lmod)
1.10.0
GCCcore/14.3.0 lz4/1.10.0
1.9.4
lz4/1.9.4
1.9.4
GCCcore/13.2.0 lz4/1.9.4

magma

The MAGMA project aims to develop a dense linear algebra library similar to LAPACK but for heterogeneous/hybrid architectures, starting with current Multicore+GPU systems.

Versions Environment loading command (via Lmod)
2.9.0-CUDA-12.9.1
GCC/14.3.0 OpenMPI/5.0.8 magma/2.9.0-CUDA-12.9.1
2.7.2-CUDA-12.8.0
GCC/13.2.0 OpenMPI/5.0.3 magma/2.7.2-CUDA-12.8.0
2.7.2-CUDA-12.4.0
GCC/13.2.0 OpenMPI/5.0.3 magma/2.7.2-CUDA-12.4.0

make

GNU version of make utility

Versions Environment loading command (via Lmod)
4.4.1
GCCcore/14.3.0 make/4.4.1
4.4.1
GCCcore/13.2.0 make/4.4.1

matplotlib

matplotlib is a python 2D plotting library which produces publication quality figures in a variety of hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python and ipython shell, web application servers, and six graphical user interface toolkits.

Versions Environment loading command (via Lmod)
3.8.2
GCC/13.2.0 matplotlib/3.8.2

maturin

This project is meant as a zero configuration replacement for setuptools-rust and milksnake. It supports building wheels for python 3.5+ on windows, linux, mac and freebsd, can upload them to pypi and has basic pypy and graalpy support.

Versions Environment loading command (via Lmod)
1.9.1
GCCcore/14.3.0 maturin/1.9.1
1.3.1
GCCcore/13.2.0 maturin/1.3.1

meson-python

Python build backend (PEP 517) for Meson projects

Versions Environment loading command (via Lmod)
0.18.0
GCCcore/14.3.0 meson-python/0.18.0
0.15.0
GCCcore/13.2.0 meson-python/0.15.0

motif

Motif refers to both a graphical user interface (GUI) specification and the widget toolkit for building applications that follow that specification under the X Window System on Unix and other POSIX-compliant systems. It was the standard toolkit for the Common Desktop Environment and thus for Unix.

Versions Environment loading command (via Lmod)
2.3.8
GCCcore/13.2.0 motif/2.3.8

mpg123

Fast console MPEG Audio Player and decoder library

Versions Environment loading command (via Lmod)
1.32.10
GCCcore/13.2.0 mpg123/1.32.10

mpi4py

MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors.

Versions Environment loading command (via Lmod)
4.1.0
GCC/14.3.0 OpenMPI/5.0.8 mpi4py/4.1.0

nbclassic

NbClassic provides a backwards compatible Jupyter Notebook interface that you can install side-by-side with the latest versions: That way, you can fearlessly upgrade without worrying about your classic extensions and customizations breaking.

Versions Environment loading command (via Lmod)
1.3.3
GCCcore/14.3.0 nbclassic/1.3.3

ncurses

The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses.

Versions Environment loading command (via Lmod)
6.5
ncurses/6.5
6.5
GCCcore/14.3.0 ncurses/6.5
6.4
ncurses/6.4
6.4
GCCcore/13.2.0 ncurses/6.4
6.4
GCCcore/12.3.0 ncurses/6.4
6.1
ncurses/6.1

netCDF

NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.

Versions Environment loading command (via Lmod)
4.9.3
GCC/14.3.0 OpenMPI/5.0.8 netCDF/4.9.3
4.9.2
GCC/13.2.0 OpenMPI/5.0.3 netCDF/4.9.2

netCDF-Fortran

NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.

Versions Environment loading command (via Lmod)
4.6.1
GCC/13.2.0 OpenMPI/5.0.3 netCDF-Fortran/4.6.1

nettle

Nettle is a cryptographic library that is designed to fit easily in more or less any context: In crypto toolkits for object-oriented languages (C++, Python, Pike, ...), in applications like LSH or GNUPG, or even in kernel space.

Versions Environment loading command (via Lmod)
3.10.2
GCCcore/14.3.0 nettle/3.10.2

nodejs

Node.js is a platform built on Chrome's JavaScript runtime for easily building fast, scalable network applications. Node.js uses an event-driven, non-blocking I/O model that makes it lightweight and efficient, perfect for data-intensive real-time applications that run across distributed devices.

Versions Environment loading command (via Lmod)
22.17.1
GCCcore/14.3.0 nodejs/22.17.1
20.9.0
GCCcore/13.2.0 nodejs/20.9.0

numactl

The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program.

Versions Environment loading command (via Lmod)
2.0.19
GCCcore/14.3.0 numactl/2.0.19
2.0.16
GCCcore/13.2.0 numactl/2.0.16

nvidia-compilers

C, C++ and Fortran compilers included with the NVIDIA HPC SDK

Versions Environment loading command (via Lmod)
25.9-CUDA-12.9.1
nvidia-compilers/25.9-CUDA-12.9.1

nvofbf

NVHPC based compiler toolchain, including OpenMPI for MPI support.

Versions Environment loading command (via Lmod)
2023b
nvofbf/2023b

nvompi

NVHPC based compiler toolchain, including OpenMPI for MPI support.

Versions Environment loading command (via Lmod)
2023b
nvompi/2023b

nvompic

NVHPC based compiler toolchain, including OpenMPI for MPI support.

Versions Environment loading command (via Lmod)
2025b
nvompic/2025b
2023b
nvompic/2023b

nvtop

htop-like GPU usage monitor

Versions Environment loading command (via Lmod)
3.1.0
GCCcore/13.2.0 nvtop/3.1.0

parallel

parallel: Build and execute shell commands in parallel

Versions Environment loading command (via Lmod)
20250922
GCCcore/14.3.0 parallel/20250922
20240322
GCCcore/13.2.0 parallel/20240322

patchelf

PatchELF is a small utility to modify the dynamic linker and RPATH of ELF executables.

Versions Environment loading command (via Lmod)
0.18.0
GCCcore/14.3.0 patchelf/0.18.0
0.18.0
GCCcore/13.2.0 patchelf/0.18.0

pixman

Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server.

Versions Environment loading command (via Lmod)
0.46.4
GCCcore/14.3.0 pixman/0.46.4
0.42.2
pixman/0.42.2
0.42.2
GCCcore/13.2.0 pixman/0.42.2

pkgconf

pkgconf is a program which helps to configure compiler and linker flags for development libraries. It is similar to pkg-config from freedesktop.org.

Versions Environment loading command (via Lmod)
2.4.3
GCCcore/14.3.0 pkgconf/2.4.3
2.0.3
pkgconf/2.0.3
2.0.3
GCCcore/13.2.0 pkgconf/2.0.3
1.9.5
GCCcore/12.3.0 pkgconf/1.9.5
1.8.0
pkgconf/1.8.0

pkgconfig

pkgconfig is a Python module to interface with the pkg-config command line tool

Versions Environment loading command (via Lmod)
1.5.5-python
GCCcore/13.2.0 pkgconfig/1.5.5-python

poetry

Python packaging and dependency management made easy. Poetry helps you declare, manage and install dependencies of Python projects, ensuring you have the right stack everywhere.

Versions Environment loading command (via Lmod)
2.1.3
GCCcore/14.3.0 poetry/2.1.3
1.6.1
GCCcore/13.2.0 poetry/1.6.1

pro-viz

pro-viz env setter

Versions Environment loading command (via Lmod)
1.10.2
pro-viz/1.10.2
1.10.1
pro-viz/1.10.1

psutil

A cross-platform process and system utilities module for Python

Versions Environment loading command (via Lmod)
7.0.0
GCCcore/14.3.0 psutil/7.0.0
6.1.0
GCCcore/13.2.0 psutil/6.1.0

psycopg

Psycopg is the most popular PostgreSQL adapter for the Python programming language.

Versions Environment loading command (via Lmod)
3.2.9
GCCcore/14.3.0 psycopg/3.2.9
3.1.18
GCCcore/13.2.0 psycopg/3.1.18

pybind11

pybind11 is a lightweight header-only library that exposes C++ types in Python and vice versa, mainly to create Python bindings of existing C++ code.

Versions Environment loading command (via Lmod)
3.0.0
GCC/14.3.0 pybind11/3.0.0
2.11.1
GCCcore/13.2.0 pybind11/2.11.1

pydantic

Data validation and settings management using Python type hinting.

Versions Environment loading command (via Lmod)
2.11.9
GCCcore/14.3.0 pydantic/2.11.9

pyperf

The Python pyperf module is a toolkit to write, run and analyze benchmarks

Versions Environment loading command (via Lmod)
2.5.0
GCCcore/13.2.0 pyperf/2.5.0

pyvips

This module wraps the libvips image processing library. libvips is a demand-driven, horizontally threaded image processing library.

Versions Environment loading command (via Lmod)
2.2.3
GCC/13.2.0 pyvips/2.2.3

rclone

Rclone is a command line program to sync files and directories to and from a variety of online storage services

Versions Environment loading command (via Lmod)
1.67.0
rclone/1.67.0

re2c

re2c is a free and open-source lexer generator for C and C++. Its main goal is generating fast lexers: at least as fast as their reasonably optimized hand-coded counterparts. Instead of using traditional table-driven approach, re2c encodes the generated finite state automata directly in the form of conditional jumps and comparisons.

Versions Environment loading command (via Lmod)
4.3
GCCcore/14.3.0 re2c/4.3
3.1
GCCcore/13.2.0 re2c/3.1

scikit-build

Scikit-Build, or skbuild, is an improved build system generator for CPython C/C++/Fortran/Cython extensions.

Versions Environment loading command (via Lmod)
0.18.1
GCCcore/14.3.0 scikit-build/0.18.1
0.17.6
GCCcore/13.2.0 scikit-build/0.17.6

scikit-build-core

Scikit-build-core is a complete ground-up rewrite of scikit-build on top of modern packaging APIs. It provides a bridge between CMake and the Python build system, allowing you to make Python modules with CMake.

Versions Environment loading command (via Lmod)
0.11.5
GCCcore/14.3.0 scikit-build-core/0.11.5

setuptools-rust

setuptools-rust is a plugin for setuptools to build Rust Python extensions implemented with PyO3 or rust-cpython.

Versions Environment loading command (via Lmod)
1.11.0
GCCcore/14.3.0 setuptools-rust/1.11.0
1.8.0
GCCcore/13.2.0 setuptools-rust/1.8.0

snappy

Snappy is a compression/decompression library. It does not aim for maximum compression, or compatibility with any other compression library; instead, it aims for very high speeds and reasonable compression.

Versions Environment loading command (via Lmod)
1.2.2
GCCcore/14.3.0 snappy/1.2.2
1.1.10
GCCcore/13.2.0 snappy/1.1.10

sonic

Sonic is a simple algorithm for speeding up or slowing down speech. However, it's optimized for speed ups of over 2X, unlike previous algorithms for changing speech rate. The Sonic library is a very simple ANSI C library that is designed to easily be integrated into streaming voice applications, like TTS back ends.

Versions Environment loading command (via Lmod)
20180202
GCC/13.2.0 sonic/20180202

spin

Developer tool for scientific Python libraries

Versions Environment loading command (via Lmod)
0.14
GCCcore/14.3.0 spin/0.14

tbb

Intel(R) Threading Building Blocks (Intel(R) TBB) lets you easily write parallel C++ programs that take full advantage of multicore performance, that are portable, composable and have future-proof scalability.

Versions Environment loading command (via Lmod)
2022.2.0
GCCcore/14.3.0 tbb/2022.2.0

tcsh

Tcsh is an enhanced, but completely compatible version of the Berkeley UNIX C shell (csh). It is a command language interpreter usable both as an interactive login shell and a shell script command processor. It includes a command-line editor, programmable word completion, spelling correction, a history mechanism, job control and a C-like syntax.

Versions Environment loading command (via Lmod)
6.24.10
GCCcore/12.3.0 tcsh/6.24.10

tesseract

Tesseract is an optical character recognition engine

Versions Environment loading command (via Lmod)
5.5.0
GCCcore/13.2.0 tesseract/5.5.0

tmux

tmux is a terminal multiplexer: it enables a number of terminals to be created, accessed, and controlled from a single screen. tmux may be detached from a screen and continue running in the background, then later reattached.

Versions Environment loading command (via Lmod)
3.5a
tmux/3.5a

tornado

Tornado is a Python web framework and asynchronous networking library.

Versions Environment loading command (via Lmod)
6.5.1
GCCcore/14.3.0 tornado/6.5.1
6.4
GCCcore/13.2.0 tornado/6.4

typing-extensions

Typing Extensions - Backported and Experimental Type Hints for Python

Versions Environment loading command (via Lmod)
4.14.1
GCCcore/14.3.0 typing-extensions/4.14.1
4.10.0
GCCcore/13.2.0 typing-extensions/4.10.0

util-linux

Set of Linux utilities

Versions Environment loading command (via Lmod)
2.41
GCCcore/14.3.0 util-linux/2.41
2.39
util-linux/2.39
2.39
GCCcore/13.2.0 util-linux/2.39

virtualenv

A tool for creating isolated virtual python environments.

Versions Environment loading command (via Lmod)
20.32.0
GCCcore/14.3.0 virtualenv/20.32.0
20.24.6
GCCcore/13.2.0 virtualenv/20.24.6

x264

x264 is a free software library and application for encoding video streams into the H.264/MPEG-4 AVC compression format, and is released under the terms of the GNU GPL.

Versions Environment loading command (via Lmod)
20250831
GCCcore/14.3.0 x264/20250831
20231019
GCCcore/13.2.0 x264/20231019

x265

x265 is a free software library and application for encoding video streams into the H.265 AVC compression format, and is released under the terms of the GNU GPL.

Versions Environment loading command (via Lmod)
4.1
GCCcore/14.3.0 x265/4.1
3.5
GCCcore/13.2.0 x265/3.5

xorg-macros

X.org macros utilities.

Versions Environment loading command (via Lmod)
1.20.2
GCCcore/14.3.0 xorg-macros/1.20.2
1.20.0
xorg-macros/1.20.0
1.20.0
GCCcore/13.2.0 xorg-macros/1.20.0

xxd

xxd is part of the VIM package and this will only install xxd, not vim! xxd converts to/from hexdumps of binary files.

Versions Environment loading command (via Lmod)
9.1.1775
GCCcore/14.3.0 xxd/9.1.1775

zlib

zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system.

Versions Environment loading command (via Lmod)
1.3.1
zlib/1.3.1
1.3.1
GCCcore/14.3.0 zlib/1.3.1
1.2.13
zlib/1.2.13
1.2.13
GCCcore/13.2.0 zlib/1.2.13
1.2.13
GCCcore/12.3.0 zlib/1.2.13

zsh

Zsh is a shell designed for interactive use, although it is also a powerful scripting language.

Versions Environment loading command (via Lmod)
5.9
zsh/5.9

zstd

Zstandard is a real-time compression algorithm, providing high compression ratios. It offers a very wide range of compression/speed trade-off, while being backed by a very fast decoder. It also offers a special mode for small data, called dictionary compression, and can create dictionaries from any sample set.

Versions Environment loading command (via Lmod)
1.5.7
GCCcore/14.3.0 zstd/1.5.7
1.5.5
zstd/1.5.5
1.5.5
GCCcore/13.2.0 zstd/1.5.5

Last update: March 21, 2026